Monday, November 30, 2015

Using phytoremediation for the removal of 2,4,6-trinitrotoluene

Explosives and explosive-related materials are used in many capacities, which include mining, surface quarrying, construction and demolition, and weapons manufacturing. While explosives, such as 2,4,6-trinitrotoluene (TNT), have acted as useful avenues for the advancement of human civilization, there is a side to TNT that we rarely think about, let alone discuss: what happens to TNT after an explosion? Not all TNT is consumed during an explosion. In fact, the after-explosion TNT residues are considered pollutants that settle over millions of acres at waste sites, mining areas and conflict (war) zones. These residues are very toxic to animals, but also degrade the biodiversity in soils and severely disrupt plant foliar growth and root systems. In order to remediate these contaminated soils researchers often use phytoremediation, or the use of plants as a “filter,” to removed pollutants from soil and water medias.

In light of these issues, a recent article from The Christian Science Monitor (CSM) titled “Mutant plant munches TNT, could help solve cleanup problems,” discusses a study from the United Kingdom’s University of York recently published in Science that makes use of a mutated relative of the cabbage plant, Arabidopsis thaliana, to remediate TNT-contaminated soils. In the study, led by Rylott and Bruce, Arabidopsis was selected due to its greater root growth in the presence of TNT, thereby being more tolerant to TNT presence than most plants and a better candidate for TNT detoxification by living plant organisms. The researchers mutated a gene in the plant strain to cause a deficiency of a specific enzyme, monodehydroascorbate reductase (MDHAR6), which protects plants from oxidative stress. This enzyme generates a superoxide from TNT, which as, a reactive oxygen species, would oxidize and breakdown plant material (figure below). While the principal investigators expected the mutation would increase the performance of enzymes in the plant to detoxify TNT, the mutation instead did not produce any MDHAR6, thereby making TNT completely harmless to the plant. This increases the mutant plant’s tolerance and maintains its uptake of TNT in contaminated soils. The tolerance of the mutant Arabidopsis is specific only to TNT.

The CSM article, which is largely a summary of the peer-reviewed article, does however contribute further statements from the researchers. The researchers state that there are still a few speed bumps that need to be taken care of in the follow up research, namely the confirmation that TNT remains inactive after death and decomposition of the plant material. But they are hopeful in the article, stating he is “..fairly confident that the TNT’s been locked up in the this material…it’s incredibly difficult to extract the transformed TNT once it’s been taken up into the plant.” The articles goes on to say that the greatest issue lies in public acceptance of using these mutants to remediate soils, since there is a general public aversion to using genetically modified organisms (or GMOs).

I felt as if the journal article stated the issues with using the modified Arabidopsis very well, that is, the fixation of TNT within the plant media during decomposition of the material. However, if the TNT is not fixated, this could create disposal issues. If not fixated, TNT will continue to be present in affected areas through the plant life cycle, and other disposal methods, such as burning,  may not be applicable here due to the nature of the pollutant. Overall, I found the CSM article very representative of the peer-reviewed journal article and appreciated that it was straight science in layman’s terms without any leaning politics or “sensationalizing” incorporated by the CSM author.
  



11 comments:

  1. Nice post Olivia. This is a pretty interesting article. The MDHAR6 gene functions in a plant to prevent oxidative stress. That thinking in mind, they imagined overexpression of this gene would be required to protect the plant from TNT since it creates superoxide (a stressful oxidant), so it is pretty incredible they were able to conclude that this TNT-sequestering mutant was only made possible by the deletion of the MDHAR6 gene. It is also nice that this CSM site wrote on this because this is probably a very specialized field of study (botany, organic chemistry, and genetics) that is easily overlooked. Kudos!

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  2. "this mutation appears to have increased the plants' tolerance for TNT, but not for a range of other compounds known to stress plants."

    From what I understand, the scientists focused on making the plants more resistant to TNT only, but what I wonder is if there are other chemicals at these sites that may present issues for the plants. The explosives likely released other compounds that may affect plant growth and thus hinder the sequestration of TNT.

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    1. Very good point! Not much was mentioned on this front in either the CSM article or the Science paper, but I imagine it is an area of concern.

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  3. I like how you covered this topic. Humans don't think a lot about the consequences of war on the environment. This is something that should be looked at more closely in the future.

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  4. The results that indicate that it is TNT's metabolite that is toxic to plants is very interesting in regards to how the mutation that stops TNT's metabolism does not help stop oxidation stress for other compounds. Therefore this research has very important implications for bio-transformation.

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  5. The article is a well rounded summary of what the study was about. I particularly enjoyed the future direction towards fully understanding the full mechanism of MDHAR6 pathway. With the figures show a practical way to the interpretation of their findings which gave a clear understanding of their findings.

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  6. I thought what you mentioned about disposal issues was interesting. This is something that one would have to be cautious of when implementing phytoremediation to remove TNT, especially if the TNT did not remain fixated after a certain amount of time passed.

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  7. Great selection of articles, Olivia! I do agree with your statement that not many people consider what happens to all those explosives once war is over. Not only is war a huge toll on the economy and society, but on the environment as well. Therefore better measures are needed for remediation of affected areas, and phytoremediation seems like an effective, eco-friendly way to do so. As previously mentioned, I'll be looking forward to the publication of the results for their future directions, speciallu with understanding the mechanism given their "completely opposite results". I also liked that they will try to see if the TNT keeps being fixated after decomposition of the plant. I'm also quite curious which plants they would study next, or try to mutate to have this resistance for the TNT clean up. Even though the CSM did a great job summarizing the science in a language easy to understand for the public, I was not such a fan of the structure of the article. Lastly, I have to say that this is one of those cases where GMOs have a very positive impact but, as mentioned in the CSM article, some people (specially the misinformed population) may be reluctant to implementation due to this.

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  8. Nice post. It's a very interesting topic. I have two questions for the phytoremediation technology. One is whether this technology has some adverse side effects. For example, is it possible that some other toxic chemicals will be generated in this technology? The other is the rate to remove the TNT by using this technology. We may need to consider if this technology is cost-efficient if the rate is too slow.

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  9. This is a great post! I really enjoyed the CSM article, I thought it was very well written and gave great information to the public in a very easy to understand way. I also think the topic of phytoremediation is very interesting but i'm also concerned with the time it will take to remove all the TNT. I wonder if they have a timeline for this type of cleanup process.

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  10. I'm impressed with the Science article and the eye-catching title of the CSM article. The reported selective end results of the mutation of MDHAR6 is impressive. The coverage from the CSM article was significantly better than I had expected given the title. The reporting and added comments from the author were fair and well described for a general audience.

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